GTF3C2 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

GTF3C2

General transcription factor IIIC subunit 2. (909 aa)

Predicted Functional Partners:

ENSODEP00000017151

0.995

GTF3C5

0.995

GTF3C4

0.994

LOC101578331

0.989

ENSODEP00000013563

0.989

BRF1

0.910

BRF2

0.901

MYSM1

0.846

POLR3A

0.806

ENSODEP00000025351

0.797

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRF1	BRF2	ENSODEP00000004109	ENSODEP00000006315	BRF1 RNA polymerase III transcription initiation factor subunit.	BRF2 RNA polymerase III transcription initiation factor subunit.	0.939
BRF1	ENSODEP00000013563	ENSODEP00000004109	ENSODEP00000013563	BRF1 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.996
BRF1	ENSODEP00000017151	ENSODEP00000004109	ENSODEP00000017151	BRF1 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.954
BRF1	GTF3C2	ENSODEP00000004109	ENSODEP00000012723	BRF1 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 2.	0.910
BRF1	GTF3C4	ENSODEP00000004109	ENSODEP00000022228	BRF1 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 4.	0.949
BRF1	GTF3C5	ENSODEP00000004109	ENSODEP00000021292	BRF1 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 5.	0.964
BRF1	LOC101578331	ENSODEP00000004109	ENSODEP00000013307	BRF1 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.996
BRF1	POLR3A	ENSODEP00000004109	ENSODEP00000020531	BRF1 RNA polymerase III transcription initiation factor subunit.	RNA polymerase III subunit A.	0.994
BRF2	BRF1	ENSODEP00000006315	ENSODEP00000004109	BRF2 RNA polymerase III transcription initiation factor subunit.	BRF1 RNA polymerase III transcription initiation factor subunit.	0.939
BRF2	ENSODEP00000013563	ENSODEP00000006315	ENSODEP00000013563	BRF2 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.993
BRF2	ENSODEP00000017151	ENSODEP00000006315	ENSODEP00000017151	BRF2 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.939
BRF2	GTF3C2	ENSODEP00000006315	ENSODEP00000012723	BRF2 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 2.	0.901
BRF2	GTF3C4	ENSODEP00000006315	ENSODEP00000022228	BRF2 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 4.	0.930
BRF2	GTF3C5	ENSODEP00000006315	ENSODEP00000021292	BRF2 RNA polymerase III transcription initiation factor subunit.	General transcription factor IIIC subunit 5.	0.964
BRF2	LOC101578331	ENSODEP00000006315	ENSODEP00000013307	BRF2 RNA polymerase III transcription initiation factor subunit.	annotation not available	0.993
BRF2	POLR3A	ENSODEP00000006315	ENSODEP00000020531	BRF2 RNA polymerase III transcription initiation factor subunit.	RNA polymerase III subunit A.	0.986
ENSODEP00000013563	BRF1	ENSODEP00000013563	ENSODEP00000004109	annotation not available	BRF1 RNA polymerase III transcription initiation factor subunit.	0.996
ENSODEP00000013563	BRF2	ENSODEP00000013563	ENSODEP00000006315	annotation not available	BRF2 RNA polymerase III transcription initiation factor subunit.	0.993
ENSODEP00000013563	ENSODEP00000017151	ENSODEP00000013563	ENSODEP00000017151	annotation not available	annotation not available	0.991
ENSODEP00000013563	GTF3C2	ENSODEP00000013563	ENSODEP00000012723	annotation not available	General transcription factor IIIC subunit 2.	0.989