STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLRN2Clarin 2. (232 aa)    
Predicted Functional Partners:
ELMO2
Engulfment and cell motility 2.
    
 0.957
ELMO1
Engulfment and cell motility 1.
    
 0.957
ELMO3
Engulfment and cell motility 3.
    
 0.957
CRK
CRK proto-oncogene, adaptor protein.
    
 0.952
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.952
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
 
  0.751
ENSODEP00000000448
annotation not available
    
 0.731
ENSODEP00000000477
annotation not available
    
 0.731
ENSODEP00000001281
annotation not available
    
 0.731
RND3
Rho family GTPase 3.
    
 0.731
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.