STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P4HBProlyl 4-hydroxylase subunit beta. (509 aa)    
Predicted Functional Partners:
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.998
HSP90B1
Heat shock protein 90 beta family member 1.
  
 0.997
ENSODEP00000009816
annotation not available
   
 0.995
P4HA2
Prolyl 4-hydroxylase subunit alpha 2.
   
 0.995
CALR
Calreticulin.
   
 0.995
ENSODEP00000021353
annotation not available
   
 0.995
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.992
ENSODEP00000021057
annotation not available
  
 0.991
PDIA4
Protein disulfide isomerase family A member 4.
   
0.990
ENSODEP00000001057
annotation not available
  
0.989
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.