STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOD1L1Biorientation of chromosomes in cell division 1 like 1. (2745 aa)    
Predicted Functional Partners:
CXXC1
CXXC finger protein 1.
    
 0.991
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.984
HCFC2
Host cell factor C2.
    
  0.975
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.966
ENSODEP00000021195
annotation not available
   
 0.948
WDR5B
WD repeat domain 5B.
   
 0.948
ENSODEP00000027027
annotation not available
   
 0.948
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.941
ENSODEP00000019711
annotation not available
    
 0.941
HCFC1
Host cell factor C1.
    
  0.930
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.