STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (156 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.978
LDB2
LIM domain binding 2.
    
 0.977
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.870
GATA1
GATA binding protein 1.
    
 0.828
LHX2
LIM homeobox 2.
   
 
0.820
LHX9
LIM homeobox 9.
   
 
0.820
GATA6
GATA binding protein 6.
    
 0.814
GATA5
GATA binding protein 5.
    
 0.811
GATA4
GATA binding protein 4.
    
 0.811
GATA3
GATA binding protein 3.
    
 0.810
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.