STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCBSarcoglycan beta. (316 aa)    
Predicted Functional Partners:
DRP2
Dystrophin related protein 2.
     
 0.920
DAG1
Dystroglycan 1.
     
 0.920
SGCZ
Sarcoglycan zeta.
     
 0.894
SGCD
Sarcoglycan delta.
     
 0.894
SGCA
Sarcoglycan alpha.
     
 0.890
ENSODEP00000002357
annotation not available
     
 0.889
ENSODEP00000012899
annotation not available
     
 0.889
ENSODEP00000010373
annotation not available
     
 0.874
DYTN
Dystrotelin.
     
 0.874
Dmd
annotation not available
     
 0.874
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.