STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000013319annotation not available (215 aa)    
Predicted Functional Partners:
TNFSF14
TNF superfamily member 14.
    
 0.996
BTLA
B and T lymphocyte associated.
   
 0.992
TRAF2
TNF receptor associated factor 2.
    
 0.979
TRAF5
TNF receptor associated factor 5.
    
 0.976
LTA
Lymphotoxin alpha.
   
 0.972
TRAF1
TNF receptor associated factor 1.
    
 0.970
TNFSF11
TNF superfamily member 11.
   
 0.968
CD40LG
CD40 ligand.
   
 0.966
TNFSF15
TNF superfamily member 15.
   
 0.965
LTB
Lymphotoxin beta.
   
 0.962
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.