STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTG2Actin gamma 2, smooth muscle. (376 aa)    
Predicted Functional Partners:
MYH11
Myosin heavy chain 11.
   
 0.996
ACTA2
Actin alpha 2, smooth muscle.
  
0.988
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.983
DCTN2
Dynactin subunit 2.
    
 0.972
ARID4B
AT-rich interaction domain 4B.
    
 0.969
Arid4a
AT-rich interaction domain 4A.
    
 0.969
ENSODEP00000020185
annotation not available
    
 0.969
MYH9
Myosin heavy chain 9.
   
 0.968
ENSODEP00000018403
annotation not available
   
 0.968
ENSODEP00000026942
annotation not available
   
 0.968
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.