STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000014077annotation not available (404 aa)    
Predicted Functional Partners:
PICK1
Protein interacting with PRKCA 1.
    
 
 0.775
RAB2B
RAB2B, member RAS oncogene family.
    
 
 0.522
Rab2a
annotation not available
    
 
 0.522
ENSODEP00000005505
annotation not available
    
 
 0.522
ENSODEP00000013502
annotation not available
    
 
 0.522
ENSODEP00000022871
annotation not available
    
 
 0.522
DNAJC27
DnaJ heat shock protein family (Hsp40) member C27.
    
 
 0.494
PRR5
Proline rich 5.
      
 0.478
RUNDC1
RUN domain containing 1.
    
 
 0.452
SGSM2
Small G protein signaling modulator 2.
   
 
 0.412
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.