STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA8ATP binding cassette subfamily A member 8. (1581 aa)    
Predicted Functional Partners:
ATP5F1A
ATP synthase F1 subunit alpha.
   
 
 0.791
ATP1B1
ATPase Na+/K+ transporting subunit beta 1.
     
 0.766
ABCD4
ATP binding cassette subfamily D member 4.
    
0.744
ENSODEP00000009884
annotation not available
    
 0.734
ENSODEP00000022080
annotation not available
    
 0.734
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
    
0.694
ABCG5
ATP binding cassette subfamily G member 5.
     
 0.678
ABCG8
ATP binding cassette subfamily G member 8.
     
0.678
ENSODEP00000015704
annotation not available
   
 
  0.673
ENSODEP00000017800
annotation not available
   
 
  0.673
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.