STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKK3Dickkopf WNT signaling pathway inhibitor 3. (348 aa)    
Predicted Functional Partners:
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.801
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
      
 0.793
LRP5
LDL receptor related protein 5.
    
 0.790
ENSODEP00000023620
annotation not available
   
 0.775
TNFRSF17
TNF receptor superfamily member 17.
    
 0.773
IL33
Interleukin 33.
    
 0.767
CD34
CD34 molecule.
   
 
 0.766
KREMEN1
Kringle containing transmembrane protein 1.
    
 0.765
IL1B
Interleukin 1 beta.
    
 0.754
ENSODEP00000009256
annotation not available
    
 0.736
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.