STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VANGL1VANGL planar cell polarity protein 1. (524 aa)    
Predicted Functional Partners:
DVL2
Dishevelled segment polarity protein 2.
    
 0.991
PRICKLE1
Prickle planar cell polarity protein 1.
    
 0.990
PRICKLE3
Prickle planar cell polarity protein 3.
    
 0.989
DVL1
Dishevelled segment polarity protein 1.
    
 0.986
PRICKLE2
Prickle planar cell polarity protein 2.
    
 0.983
DVL3
Dishevelled segment polarity protein 3.
    
 0.981
VANGL2
VANGL planar cell polarity protein 2.
  
 
0.958
TES
Testin LIM domain protein.
    
 0.925
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.923
DLG2
Discs large MAGUK scaffold protein 2.
    
 0.923
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.