STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTFLactotransferrin. (691 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor.
  
 0.994
TFR2
Transferrin receptor 2.
  
 0.978
EPO
Erythropoietin.
  
 0.939
HFE
Homeostatic iron regulator.
    
 0.915
CAMP
Cathelicidin antimicrobial peptide.
   
 
 0.876
HJV
Hemojuvelin BMP co-receptor.
     
 0.873
CLU
Clusterin.
   
 0.863
UTP4
UTP4 small subunit processome component.
    
 0.837
LRP2
LDL receptor related protein 2.
    
 0.823
ENSODEP00000005901
annotation not available
     
 0.813
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.