STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGLAPBone gamma-carboxyglutamate protein. (94 aa)    
Predicted Functional Partners:
RUNX2
RUNX family transcription factor 2.
    
 0.863
GGCX
Gamma-glutamyl carboxylase.
     
 0.835
RUNX1
RUNX family transcription factor 1.
    
 0.808
RUNX3
RUNX family transcription factor 3.
    
 0.808
SLC22A8
Solute carrier family 22 member 8.
   
 
 0.665
SLC22A6
Solute carrier family 22 member 6.
   
 
 0.665
Slc22a20p
annotation not available
   
 
 0.665
CBFB
Core-binding factor subunit beta.
     
 0.659
PCSK4
Proprotein convertase subtilisin/kexin type 4.
     
 0.658
FURIN
Furin, paired basic amino acid cleaving enzyme.
     
 0.658
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.