STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCKCholecystokinin. (114 aa)    
Predicted Functional Partners:
CCKBR
Cholecystokinin B receptor.
   
 0.998
CCKAR
Cholecystokinin A receptor.
   
 0.996
QRFPR
Pyroglutamylated RFamide peptide receptor.
   
 0.980
TAC1
Tachykinin precursor 1.
     
 0.833
NTS
Neurotensin.
     
 0.833
GHRL
Ghrelin and obestatin prepropeptide.
     
 0.833
NTSR1
Neurotensin receptor 1.
   
 0.829
PROK2
Prokineticin 2.
     
 0.825
BRS3
Bombesin receptor subtype 3.
    
 0.819
MLNR
Motilin receptor.
    
 0.819
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.