STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000015536annotation not available (240 aa)    
Predicted Functional Partners:
MASP2
Mannan binding lectin serine peptidase 2.
   
 0.936
ENSODEP00000015069
annotation not available
   
0.930
SFTPC
Surfactant protein C.
   
 
 0.929
MASP1
Mannan binding lectin serine peptidase 1.
   
 0.926
HRG
Histidine rich glycoprotein.
   
 0.919
SERPING1
Serpin family G member 1.
     
 0.906
FGA
Fibrinogen alpha chain.
   
 0.905
APCS
Amyloid P component, serum.
   
 
 0.904
PLG
Plasminogen.
   
 0.899
C3
Complement C3.
    
 0.895
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.