STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM234BFamily with sequence similarity 234 member B. (626 aa)    
Predicted Functional Partners:
GLG1
Golgi glycoprotein 1.
      
 0.555
TM9SF2
Transmembrane 9 superfamily member 2.
      
 0.539
MYO18A
Myosin XVIIIA.
      
 0.508
LURAP1
Leucine rich adaptor protein 1.
      
 0.479
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
      
 0.463
TM9SF4
Transmembrane 9 superfamily member 4.
      
 0.412
RCN3
Reticulocalbin 3.
      
 0.408
RNF181
Ring finger protein 181.
      
 0.405
STX12
Syntaxin 12.
    
 
 0.403
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.