STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP2A2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2. (1042 aa)    
Predicted Functional Partners:
PLN
Phospholamban.
   
 0.993
ENSODEP00000013069
annotation not available
    
 0.967
ATP1B1
ATPase Na+/K+ transporting subunit beta 1.
    
 0.929
ATP1B2
ATPase Na+/K+ transporting subunit beta 2.
    
 0.926
HRC
Histidine rich calcium binding protein.
   
 0.925
TNNI2
Troponin I2, fast skeletal type.
   
 0.909
ATP2B1
ATPase plasma membrane Ca2+ transporting 1.
  
 
0.896
ATP2B2
ATPase plasma membrane Ca2+ transporting 2.
  
 
0.896
Atp1a3
annotation not available
  
 
0.895
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.895
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.