STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000015870annotation not available (90 aa)    
Predicted Functional Partners:
SKP2
S-phase kinase associated protein 2.
   
 0.984
CCNA2
Cyclin A2.
   
 0.971
CUL1
Cullin 1.
    
 0.969
CCNA1
Cyclin A1.
   
 0.959
CDK2
Cyclin dependent kinase 2.
   
 0.957
ENSODEP00000000373
annotation not available
   
 0.954
ENSODEP00000000419
annotation not available
   
 0.954
ENSODEP00000007881
annotation not available
   
 0.954
ENSODEP00000016980
annotation not available
   
 0.954
ENSODEP00000025432
annotation not available
   
 0.954
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.