STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mcfd2Multiple coagulation factor deficiency 2. (146 aa)    
Predicted Functional Partners:
LMAN1
Lectin, mannose binding 1.
   
 0.994
LMAN1L
Lectin, mannose binding 1 like.
   
 0.981
F8
Coagulation factor VIII.
     
 0.808
LMAN2L
Lectin, mannose binding 2 like.
     
 0.761
LMAN2
Lectin, mannose binding 2.
     
 0.760
SEC31A
SEC31 homolog A, COPII coat complex component.
     
 0.726
Sec24c
annotation not available
     
 0.725
SEC24A
SEC24 homolog A, COPII coat complex component.
     
 0.700
CTSC
Cathepsin C.
     
 0.697
ANKRD40
Ankyrin repeat domain 40.
     
 0.694
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.