STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFA1BPI fold containing family A member 1. (263 aa)    
Predicted Functional Partners:
BPIFB1
BPI fold containing family B member 1.
  
 
0.973
BPIFB4
BPI fold containing family B member 4.
   
 
 0.781
BPIFB2
BPI fold containing family B member 2.
   
 
 0.758
BPIFB6
BPI fold containing family B member 6.
   
 
 0.739
ENSODEP00000011157
annotation not available
     
 0.684
ENSODEP00000018113
annotation not available
     
 0.684
SCGB3A1
Secretoglobin family 3A member 1.
   
  
 0.611
SPINK5
Serine peptidase inhibitor, Kazal type 5.
  
 
 
 0.596
ENSODEP00000001318
annotation not available
    
  0.594
ENSODEP00000005810
annotation not available
    
  0.594
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.