STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3. (286 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1.
   
 0.981
TNNI3
Troponin I3, cardiac type.
   
 0.976
TNNT2
Troponin T2, cardiac type.
   
 0.967
TNNT1
Troponin T1, slow skeletal type.
   
 0.928
TNNT3
Troponin T3, fast skeletal type.
   
 0.927
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.926
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.921
TNNI2
Troponin I2, fast skeletal type.
   
 0.910
ACTC1
Actin alpha cardiac muscle 1.
   
 0.909
ENSODEP00000009792
annotation not available
   
 0.907
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.