STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPINSNAP associated protein. (136 aa)    
Predicted Functional Partners:
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
   
 0.996
ENSODEP00000008282
annotation not available
   
 
  0.989
ENSODEP00000016752
annotation not available
   
 
  0.989
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.985
ENSODEP00000012346
annotation not available
   
 0.983
ENSODEP00000004010
annotation not available
   
 0.980
Bloc1s1
annotation not available
   
 0.980
ENSODEP00000007967
annotation not available
   
 0.980
ENSODEP00000010037
annotation not available
   
 0.980
ENSODEP00000021972
annotation not available
   
 0.980
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.