STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AASSAminoadipate-semialdehyde synthase. (913 aa)    
Predicted Functional Partners:
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.961
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.947
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase.
  
 
 0.921
ODC1
Ornithine decarboxylase 1.
  
 
 0.904
Azin1
Antizyme inhibitor 1.
  
 
 0.904
AZIN2
Antizyme inhibitor 2.
  
 
 0.904
ACCS
1-aminocyclopropane-1-carboxylate synthase homolog (inactive).
    
 0.896
ENSODEP00000017997
annotation not available
   
 0.889
AGMAT
Agmatinase.
    
 0.887
ENSODEP00000005176
annotation not available
   
 0.884
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.