STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000016432annotation not available (67 aa)    
Predicted Functional Partners:
ENSODEP00000019231
annotation not available
    
   0.672
ENSODEP00000026399
annotation not available
    
   0.672
TGFB1
Transforming growth factor beta 1.
    
 0.573
BMP15
Bone morphogenetic protein 15.
    
 0.573
INHBC
Inhibin subunit beta C.
    
 0.573
INHBE
Inhibin subunit beta E.
    
 0.573
BMP5
Bone morphogenetic protein 5.
    
 0.573
GDF6
Growth differentiation factor 6.
    
 0.573
BMP3
Bone morphogenetic protein 3.
    
 0.573
GDF11
Growth differentiation factor 11.
    
 0.573
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.