STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000016695annotation not available (247 aa)    
Predicted Functional Partners:
RSPH3
Radial spoke head 3.
   
 0.927
ENSODEP00000000614
annotation not available
  
 
 0.900
ENSODEP00000002536
annotation not available
  
 
 0.900
ENSODEP00000019730
annotation not available
     
 0.887
ENSODEP00000010694
annotation not available
     
 0.871
ENSODEP00000026340
annotation not available
     
 0.871
RFK
Riboflavin kinase.
  
 
 0.860
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.860
NT5E
5'-nucleotidase ecto.
  
 
 0.856
NUDT12
Nudix hydrolase 12.
    
 0.854
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.