STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEX3DMex-3 RNA binding family member D. (619 aa)    
Predicted Functional Partners:
ENSODEP00000009591
annotation not available
    
 0.562
TTC37
Tetratricopeptide repeat domain 37.
      
 0.533
AP2A1
Adaptor related protein complex 2 subunit alpha 1.
    
 0.530
ZFP36L1
ZFP36 ring finger protein like 1.
   
 
 0.507
ZFP36
ZFP36 ring finger protein.
   
 
 0.507
LSM14B
LSM family member 14B.
   
 
 0.501
ENSODEP00000011885
annotation not available
   
 
 0.501
Lsm14a
annotation not available
   
 
 0.501
CDX2
Caudal type homeobox 2.
   
 
 0.495
AGO1
Argonaute RISC component 1.
   
 
 0.487
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.