STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf96Chromosome 16 open reading frame 96. (1078 aa)    
Predicted Functional Partners:
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
  0.918
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.909
S100A8
S100 calcium binding protein A8.
   
 0.898
AP2B1
Adaptor related protein complex 2 subunit beta 1.
    
  0.879
AP1B1
Adaptor related protein complex 1 subunit beta 1.
    
  0.879
KDM6A
Lysine demethylase 6A.
   
 0.842
KDM6B
Lysine demethylase 6B.
   
 0.842
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.837
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
    
  0.833
AP2S1
Adaptor related protein complex 2 subunit sigma 1.
    
  0.830
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.