STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD3SET and MYND domain containing 3. (428 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 0.977
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
   
 
 0.970
KDM6B
Lysine demethylase 6B.
   
 0.955
KDM6A
Lysine demethylase 6A.
   
 0.953
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.941
ENSODEP00000006088
annotation not available
    
 0.939
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.937
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
   
 
 0.937
CDYL
Chromodomain Y like.
   
 0.936
CDYL2
Chromodomain Y like 2.
   
 0.936
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.