STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000017844annotation not available (191 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
  
 0.999
RECQL4
RecQ like helicase 4.
  
 0.998
BLM
BLM RecQ like helicase.
  
 0.998
RAD51
RAD51 recombinase.
  
 0.998
MRE11
MRE11 homolog, double strand break repair nuclease.
  
 0.997
DNA2
DNA replication helicase/nuclease 2.
   
 0.996
MLH1
mutL homolog 1.
  
 0.996
MSH6
mutS homolog 6.
  
 0.996
MSH2
mutS homolog 2.
  
 0.996
POLA1
DNA polymerase alpha 1, catalytic subunit.
  
 0.994
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.