STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000017884annotation not available (384 aa)    
Predicted Functional Partners:
ATR
ATR serine/threonine kinase.
    
 0.996
MCM4
Minichromosome maintenance complex component 4.
   
 0.995
CDC45
Cell division cycle 45.
   
 0.994
CDC25B
Cell division cycle 25B.
   
 0.993
CDC25A
Cell division cycle 25A.
   
 0.992
CHEK2
Checkpoint kinase 2.
   
0.991
CLSPN
Claspin.
   
 0.988
RAD51
RAD51 recombinase.
   
 0.987
TP53
Tumor protein p53.
    
 0.987
WEE1
WEE1 G2 checkpoint kinase.
   
 0.980
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.