STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOAOtoancorin. (1133 aa)    
Predicted Functional Partners:
TECTA
Tectorin alpha.
      
 0.548
TECTB
Tectorin beta.
      
 0.546
METTL9
Methyltransferase like 9.
 
    
 0.545
BTBD11
BTB domain containing 11.
      
 0.528
CSMD3
CUB and Sushi multiple domains 3.
      
 0.457
SLC4A10
Solute carrier family 4 member 10.
      
 0.456
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
      
 0.443
IGSF6
Immunoglobulin superfamily member 6.
      
 0.428
LOXHD1
Lipoxygenase homology domains 1.
      
 0.407
OTOGL
Otogelin like.
      
 0.404
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.