STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000018370annotation not available (52 aa)    
Predicted Functional Partners:
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.990
MTOR
Mechanistic target of rapamycin kinase.
    
 0.990
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
 0.985
ENSODEP00000004232
annotation not available
   
 0.970
ATP5F1A
ATP synthase F1 subunit alpha.
   
 0.962
ENSODEP00000008799
annotation not available
   
 0.961
ENSODEP00000014241
annotation not available
   
 0.961
ATP5F1E
ATP synthase F1 subunit epsilon.
   
 0.960
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
   
 0.960
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
   
 0.960
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.