STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCSK6Proprotein convertase subtilisin/kexin type 6. (920 aa)    
Predicted Functional Partners:
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
   
 0.884
RXFP1
Relaxin family peptide receptor 1.
   
 0.884
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.884
RXFP2
Relaxin family peptide receptor 2.
   
 0.884
BCL10
BCL10 immune signaling adaptor.
   
 0.854
NAGA
alpha-N-acetylgalactosaminidase.
   
 0.716
SCG5
Secretogranin V.
   
 
 0.700
TGFB1
Transforming growth factor beta 1.
    
 0.695
POMC
Proopiomelanocortin.
     
 0.694
GPIHBP1
Glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1.
     
 0.685
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.