STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000018541annotation not available (136 aa)    
Predicted Functional Partners:
KDM6A
Lysine demethylase 6A.
   
 0.979
KDM6B
Lysine demethylase 6B.
   
 0.979
ENSODEP00000018031
annotation not available
  
 
0.970
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.957
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.952
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.951
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.950
ENSODEP00000014132
annotation not available
    
 0.949
ENSODEP00000015307
annotation not available
    
 0.949
ENSODEP00000016345
annotation not available
    
 0.949
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.