STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L3Dpy-19 like C-mannosyltransferase 3. (716 aa)    
Predicted Functional Partners:
CASC1
Cancer susceptibility 1.
   
    0.794
TSR3
TSR3 ribosome maturation factor.
      
 0.554
CCDC126
Coiled-coil domain containing 126.
      
 0.531
TSR1
TSR1 ribosome maturation factor.
      
 0.528
UNC5A
Unc-5 netrin receptor A.
    
 
 0.501
MANEAL
Mannosidase endo-alpha like.
    
 0.472
ASB17
Ankyrin repeat and SOCS box containing 17.
   
  
 0.469
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.468
ENOX1
ecto-NOX disulfide-thiol exchanger 1.
      
 0.463
ZPBP
Zona pellucida binding protein.
   
  
 0.460
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.