STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLX1Complexin 1. (134 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.997
ENSODEP00000024482
annotation not available
   
 0.996
STX1A
Syntaxin 1A.
    
 0.993
VAMP1
Vesicle associated membrane protein 1.
   
 0.992
STX1B
Syntaxin 1B.
    
 0.992
ENSODEP00000001781
annotation not available
   
 0.990
ENSODEP00000017069
annotation not available
   
 0.990
STX3
Syntaxin 3.
    
 0.985
STX4
Syntaxin 4.
    
 0.985
SYT2
Synaptotagmin 2.
   
 0.984
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.