STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX20T-box transcription factor 20. (422 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
 
 0.951
PHF13
PHD finger protein 13.
    
   0.895
SLC25A21
Solute carrier family 25 member 21.
    
   0.890
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.875
DR1
Down-regulator of transcription 1.
     
 0.865
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.849
ENSODEP00000015374
annotation not available
    
 
 0.849
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.849
ENSODEP00000019620
annotation not available
    
 
 0.849
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.849
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.