STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD1EH domain containing 1. (534 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.985
RAB11FIP2
RAB11 family interacting protein 2.
    
 0.965
EHD3
EH domain containing 3.
  
 
 
0.926
RAB11FIP5
RAB11 family interacting protein 5.
     
 0.923
ENSODEP00000012046
annotation not available
    
 
 0.912
ENSODEP00000007258
annotation not available
    
 0.889
EHD4
EH domain containing 4.
  
 
  
0.865
ENSODEP00000002215
annotation not available
     
 0.852
Wdfy4
WDFY family member 4.
     
 0.852
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.849
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.