STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000019700annotation not available (342 aa)    
Predicted Functional Partners:
IFT80
Intraflagellar transport 80.
  
 0.994
IFT57
Intraflagellar transport 57.
   
 0.994
IFT88
Intraflagellar transport 88.
    
 0.993
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.993
IFT172
Intraflagellar transport 172.
    
 0.991
TTC26
Tetratricopeptide repeat domain 26.
  
 
 0.991
IFT46
Intraflagellar transport 46.
    
 0.988
ENSODEP00000026204
annotation not available
   
 0.984
LOC101578923
annotation not available
   
 0.984
CHDH
Choline dehydrogenase.
    
 0.981
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.