STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC9DnaJ heat shock protein family (Hsp40) member C9. (260 aa)    
Predicted Functional Partners:
TSC1
TSC complex subunit 1.
  
 0.960
PSMG1
Proteasome assembly chaperone 1.
   
  0.958
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.948
STIP1
Stress induced phosphoprotein 1.
  
 0.946
BAG3
BCL2 associated athanogene 3.
   
 0.943
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 0.940
ENSODEP00000021704
annotation not available
    
 0.939
ENSODEP00000026641
annotation not available
    
 0.939
HSF1
Heat shock transcription factor 1.
   
 0.933
CDC37
Cell division cycle 37.
    
 0.930
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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