STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000019878annotation not available (480 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
 0.813
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.789
EPHX2
Epoxide hydrolase 2.
    
 0.787
SUOX
Sulfite oxidase.
    
 0.762
TK1
Thymidine kinase 1.
    
 0.748
ENSODEP00000008451
annotation not available
    
 0.712
ENSODEP00000022808
annotation not available
    
 0.712
ENSODEP00000001248
annotation not available
   
 0.695
ENSODEP00000004571
annotation not available
   
 0.695
ENSODEP00000005186
annotation not available
   
 0.695
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.