STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL2Kirre like nephrin family adhesion molecule 2. (701 aa)    
Predicted Functional Partners:
NPHS1
NPHS1 adhesion molecule, nephrin.
   
0.991
PTK7
Protein tyrosine kinase 7 (inactive).
    
0.893
TJP1
Tight junction protein 1.
    
 0.852
NCK2
NCK adaptor protein 2.
    
 0.810
NCK1
NCK adaptor protein 1.
    
 0.810
F12
Coagulation factor XII.
    
 0.770
HABP2
Hyaluronan binding protein 2.
    
 0.770
HGFAC
HGF activator.
    
 0.770
ABCC4
ATP binding cassette subfamily C member 4.
   
 0.746
ABCC12
ATP binding cassette subfamily C member 12.
   
 0.746
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.