STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF21TNF receptor superfamily member 21. (646 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.967
APLP2
Amyloid beta precursor like protein 2.
    
 
 0.919
APLP1
Amyloid beta precursor like protein 1.
    
 
 0.880
PODXL2
Podocalyxin like 2.
    
 
 0.861
HHIP
Hedgehog interacting protein.
    
 
 0.805
ENSODEP00000012044
annotation not available
    
 
 0.805
ENSODEP00000013769
annotation not available
    
 
 0.805
TRADD
TNFRSF1A associated via death domain.
    
 
 0.746
CASP6
Caspase 6.
      
 0.532
PLA2G4A
Phospholipase A2 group IVA.
      
 0.481
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.