STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STOML1Stomatin like 1. (399 aa)    
Predicted Functional Partners:
ECI2
enoyl-CoA delta isomerase 2.
  
 0.952
CAT
Catalase.
  
 0.943
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.939
ACOX3
acyl-CoA oxidase 3, pristanoyl.
  
 0.935
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 0.931
YME1L1
YME1 like 1 ATPase.
  
 0.931
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
  
 
 0.931
LOC101577819
AFG3-like protein 1.
  
 0.931
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.931
ENSODEP00000012100
annotation not available
  
 0.931
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.