STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC5Transient receptor potential cation channel subfamily C member 5. (974 aa)    
Predicted Functional Partners:
TRPC4
Transient receptor potential cation channel subfamily C member 4.
  
 
0.965
TRPC3
Transient receptor potential cation channel subfamily C member 3.
  
 
0.964
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
0.964
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
     
 0.913
TRPC7
Transient receptor potential cation channel subfamily C member 7.
  
 
0.888
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.870
STIM1
Stromal interaction molecule 1.
    
 0.864
MYO3A
Myosin IIIA.
   
 
 0.862
MYO3B
Myosin IIIB.
   
 
 0.862
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
     
 0.849
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.