STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubl7Ubiquitin like 7. (380 aa)    
Predicted Functional Partners:
ENSODEP00000010090
annotation not available
    
 0.993
ENSODEP00000010785
annotation not available
    
 0.993
ENSODEP00000024666
annotation not available
   
 0.974
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.965
TRAF7
TNF receptor associated factor 7.
    
 0.963
ENSODEP00000009779
annotation not available
   
 0.962
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.962
ENSODEP00000017298
annotation not available
    
 0.961
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.956
PSMD2
Proteasome 26S subunit, non-ATPase 2.
    
 0.948
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.