STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000020773annotation not available (134 aa)    
Predicted Functional Partners:
ENSODEP00000017298
annotation not available
   
 0.998
Cul2
annotation not available
   
 0.984
CUL5
Cullin 5.
    
 0.975
ENSODEP00000024771
annotation not available
   
 0.974
ENSODEP00000013517
annotation not available
    
 0.963
Eloa
Elongin A.
    
 0.963
ENSODEP00000018880
annotation not available
    
 0.959
ENSODEP00000000769
annotation not available
   
 0.958
ENSODEP00000011191
annotation not available
   
 0.958
SOCS4
Suppressor of cytokine signaling 4.
    
 0.950
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.