STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIRT6Sirtuin 6. (344 aa)    
Predicted Functional Partners:
SIRT1
Sirtuin 1.
   
 0.984
SIRT5
Sirtuin 5.
  
0.967
SIRT4
Sirtuin 4.
  
  
0.959
ENSODEP00000018880
annotation not available
    
 0.959
SIRT2
Sirtuin 2.
  
  
0.955
SIRT3
Sirtuin 3.
  
  
0.952
ENSODEP00000023932
annotation not available
    
 0.943
NADK
NAD kinase.
  
 
 0.940
NUDT12
Nudix hydrolase 12.
   
 0.940
ENSODEP00000007187
annotation not available
    
 0.939
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.