STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000020935annotation not available (193 aa)    
Predicted Functional Partners:
MLH1
mutL homolog 1.
    
 0.998
MSH4
mutS homolog 4.
  
 0.997
MSH3
mutS homolog 3.
  
 0.997
MSH6
mutS homolog 6.
  
 0.997
MSH2
mutS homolog 2.
  
 0.997
ENSODEP00000024109
annotation not available
  
 0.997
ENSODEP00000013086
annotation not available
   
 0.981
ENSODEP00000017423
annotation not available
   
 0.981
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.973
ENSODEP00000016418
annotation not available
    
 0.969
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.